publications

Published a dozen highly influential articles as first author, including Nature Communications, Nuclear acid research, Molecular Biology and Evolution, elife, molecular ecology resource, cell proliferation, and genome biology and evolution. Co-authored in Nature climate change, Nature communication, Nuclear acid research, the ISME, Genome biology and Genomics, Proteomics & Bioinformatics etc.

2024

  1. PNAS.png
    Insulin receptor orchestrates kidney antibacterial defenses
    Laura Schwartz , Aaron Simoni , Pearlly Yan , and 7 more authors
    Proceedings of the National Academy of Sciences, 2024
  2. MC.png
    2′-O-methylation at internal sites on mRNA promotes mRNA stability
    Yanqiang Li , Yang Yi , Xinlei Gao , and 8 more authors
    Molecular Cell, 2024
  3. NC_yeast.png
    Yeast EndoG prevents genome instability by degrading extranuclear DNA species
    Yang Yu* , Xin Wang*, Jordan Fox , and 8 more authors
    Nature Communications, 2024
  4. Elife.png
    Transcriptional inhibition after irradiation occurs preferentially at highly expressed genes in a manner dependent on cell cycle progression
    Zulong Chen* , Xin Wang*, Xinlei Gao , and 3 more authors
    eLife, 2024
  5. Genome sequence of the Mediterranean red coral Corallium rubrum
    Philippe Ganot , Tobias Rausch , Markus Fritz , and 6 more authors
    2024
  6. NAR_RPA.png
    RPA and Rad27 limit templated and inverted insertions at DNA breaks
    Yang Yu* , Xin Wang*, Jordan Fox , and 5 more authors
    Nucleic Acids Research, Dec 2024
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    Keratin 5 Basal Cells are Temporally Regulated Developmental and Tissue Repair Progenitors in Bladder Urothelium
    Brian Becknell , Mohammad El-Harakeh , Felipe Rodriguez-Tirado , and 5 more authors
    Am J Physiol Renal Physiol, Dec 2024

2023

  1. Spatial Multi-Omic Atlas of Pyelonephritis: TH-OR07
    Xin Wang, Israel Cotzomi Ortega , Yuriko I Sanchez-Zamora , and 6 more authors
    Journal of the American Society of Nephrology, Dec 2023
  2. Obesity Augments Urinary Tract Infection Susceptibility by Activating Focal Adhesion Kinase in Kidney Intercalated Cells: FR-PO372
    Laura Schwartz , Kristin Bender , Xin Wang, and 1 more author
    Journal of the American Society of Nephrology, Dec 2023
  3. CellProliferation.png
    mt-Ty 5 tiRNA regulates skeletal muscle cell proliferation and differentiation
    Jun Cao* , Xin Wang*, Vivek Advani , and 8 more authors
    Cell proliferation, Dec 2023
  4. NC_MECOM.png
    Epigenetic landscape reveals MECOM as an endothelial lineage regulator
    Jie Lv , Shu Meng , Qilin Gu , and 8 more authors
    nature communications, Dec 2023

2022

  1. Mutation of mutator genes marks immunotherapy efficacy
    Xin Wang, Dongyu Zhao , Yanqiang Li , and 4 more authors
    Dec 2022

2021

  1. MBE.png
    The evolution of calcification in reef-building corals
    Xin Wang, Didier Zoccola , Yi Jin Liew , and 5 more authors
    Molecular Biology and Evolution, Dec 2021
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    MACMIC reveals a dual role of CTCF in epigenetic regulation of cell identity genes
    Guangyu Wang , Bo Xia , Man Zhou , and 8 more authors
    Genomics, Proteomics & Bioinformatics, Dec 2021

2020

  1. NCC.png
    Intergenerational epigenetic inheritance in reef-building corals
    Yi Jin Liew* , Emily J Howells* , Xin Wang, and 4 more authors
    Nature Climate Change, Dec 2020
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    Machine learning uncovers cell identity regulator by histone code
    Bo Xia , Dongyu Zhao , Guangyu Wang , and 8 more authors
    Nature communications, Dec 2020
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    TADsplimer reveals splits and mergers of topologically associating domains for epigenetic regulation of transcription
    Guangyu Wang , Qingshu Meng , Bo Xia , and 8 more authors
    Genome biology, Dec 2020

2018

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    Recent expansion of heat-activated retrotransposons in the coral symbiont Symbiodinium microadriaticum
    Jit Ern Chen , Guoxin Cui , Xin Wang, and 2 more authors
    The ISME journal, Dec 2018
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    Draft genome of an iconic Red Sea reef fish, the blacktail butterflyfish (Chaetodon austriacus): current status and its characteristics
    Joseph D DiBattista , Xin Wang, Pablo Saenz-Agudelo , and 3 more authors
    Molecular ecology resources, Dec 2018

2017

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    Draft genomes of the corallimorpharians Amplexidiscus fenestrafer and Discosoma sp.
    Xin Wang, Yi Jin Liew , Yong Li , and 3 more authors
    Molecular Ecology Resources, Dec 2017
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    Genome-based analyses of six hexacorallian species reject the “naked coral” hypothesis
    Xin Wang, Guénola Drillon , Taewoo Ryu , and 2 more authors
    Genome biology and evolution, Dec 2017
  3. Using a butterflyfish genome as a general tool for RAD-Seq studies in specialized reef fish
    Joseph D DiBattista , Pablo Saenz-Agudelo , Marek J Piatek , and 3 more authors
    Molecular ecology resources, Dec 2017

2016

  1. NAR_rice.png
    Information commons for rice (IC4R)
    IC4R Project Consortium
    Nucleic acids research, Dec 2016

2015

  1. MicroRNA profiles and potential regulatory pattern during the early stage of spermatogenesis in mice
    MengMeng Luo , LiLi Hao , Fen Hu , and 8 more authors
    Science China Life Sciences, Dec 2015